Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 AL359258.3-201ENST00000622910 2331 ntBASIC13.68□□□□□ -0.22
TRAF3IP2O43734 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 AC007787.1-201ENST00000588095 1583 ntBASIC13.68□□□□□ -0.22
TRAF3IP2O43734 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 AC092552.1-201ENST00000547243 906 ntBASIC13.68□□□□□ -0.22
TRAF3IP2O43734 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 MIR3197-201ENST00000582241 73 ntBASIC13.68□□□□□ -0.22
TRAF3IP2O43734 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF3IP2O43734 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 ACE3P-201ENST00000423435 1973 ntBASIC13.67□□□□□ -0.22
TRAF3IP2O43734 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 PIN1P1-201ENST00000412108 996 ntBASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC134915.1-201ENST00000426461 574 ntBASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 TERF1P3-201ENST00000505638 1227 ntBASIC13.67□□□□□ -0.22
TRAF3IP2O43734 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC190387.1-201ENST00000551683 408 ntBASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC124283.3-201ENST00000570869 594 ntBASIC13.67□□□□□ -0.22
TRAF3IP2O43734 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC092364.2-202ENST00000597012 1073 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms