Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
KCNQ3O43525 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.43■□□□□ 0.7
KCNQ3O43525 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
KCNQ3O43525 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.43■□□□□ 0.7
KCNQ3O43525 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
KCNQ3O43525 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.43■□□□□ 0.7
KCNQ3O43525 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.43■□□□□ 0.7
KCNQ3O43525 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KCNQ3O43525 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.43■□□□□ 0.7
KCNQ3O43525 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.43■□□□□ 0.7
KCNQ3O43525 RHOQP1-201ENST00000555758 579 ntBASIC19.43■□□□□ 0.7
KCNQ3O43525 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.43■□□□□ 0.7
KCNQ3O43525 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.43■□□□□ 0.7
KCNQ3O43525 AC020914.3-201ENST00000594712 304 ntBASIC19.43■□□□□ 0.7
KCNQ3O43525 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.43■□□□□ 0.7
KCNQ3O43525 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
KCNQ3O43525 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNQ3O43525 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.42■□□□□ 0.7
KCNQ3O43525 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 SLC25A24P2-201ENST00000415059 510 ntBASIC19.42■□□□□ 0.7
KCNQ3O43525 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.42■□□□□ 0.7
KCNQ3O43525 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.42■□□□□ 0.7
KCNQ3O43525 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.42■□□□□ 0.7
KCNQ3O43525 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.42■□□□□ 0.7
KCNQ3O43525 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.42■□□□□ 0.7
KCNQ3O43525 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.42■□□□□ 0.7
KCNQ3O43525 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
KCNQ3O43525 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.42■□□□□ 0.7
KCNQ3O43525 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KCNQ3O43525 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KCNQ3O43525 AC023090.2-201ENST00000625182 2110 ntBASIC19.42■□□□□ 0.7
KCNQ3O43525 E2F3P2-201ENST00000447755 1422 ntBASIC19.42■□□□□ 0.7
KCNQ3O43525 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
KCNQ3O43525 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNQ3O43525 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
KCNQ3O43525 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
KCNQ3O43525 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNQ3O43525 CYP46A4P-201ENST00000414953 267 ntBASIC19.41■□□□□ 0.7
KCNQ3O43525 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNQ3O43525 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNQ3O43525 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.41■□□□□ 0.7
KCNQ3O43525 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.41■□□□□ 0.7
KCNQ3O43525 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.41■□□□□ 0.7
KCNQ3O43525 AC002472.3-201ENST00000640124 621 ntBASIC19.41■□□□□ 0.7
KCNQ3O43525 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
KCNQ3O43525 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.41■□□□□ 0.7
KCNQ3O43525 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNQ3O43525 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KCNQ3O43525 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
KCNQ3O43525 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNQ3O43525 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KCNQ3O43525 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
KCNQ3O43525 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.4■□□□□ 0.7
KCNQ3O43525 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms