Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00473A8K010 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00473A8K010 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00473A8K010 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
LINC00473A8K010 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00473A8K010 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00473A8K010 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00473A8K010 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00473A8K010 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00473A8K010 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00473A8K010 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC092580.3-201ENST00000430932 139 ntBASIC12.5□□□□□ -0.41
LINC00473A8K010 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00473A8K010 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00473A8K010 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.5□□□□□ -0.41
LINC00473A8K010 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC025678.2-201ENST00000562061 970 ntBASIC12.5□□□□□ -0.41
LINC00473A8K010 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC004449.1-201ENST00000564240 433 ntBASIC12.5□□□□□ -0.41
LINC00473A8K010 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC000095.1-201ENST00000603208 874 ntBASIC12.5□□□□□ -0.41
LINC00473A8K010 AL844908.2-201ENST00000609461 460 ntBASIC12.5□□□□□ -0.41
LINC00473A8K010 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC007787.1-201ENST00000588095 1583 ntBASIC12.5□□□□□ -0.41
LINC00473A8K010 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC018442.1-201ENST00000421439 2061 ntBASIC12.5□□□□□ -0.41
LINC00473A8K010 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LINC00473A8K010 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC097359.2-201ENST00000604992 2389 ntBASIC12.5□□□□□ -0.41
LINC00473A8K010 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00473A8K010 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00473A8K010 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00473A8K010 AC117489.1-201ENST00000625169 3217 ntBASIC12.5□□□□□ -0.41
LINC00473A8K010 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms