Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 OR10B1P-201ENST00000601666 907 ntBASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 AL603764.1-201ENST00000636452 321 ntBASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 AL023775.1-201ENST00000454907 1746 ntBASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3BA6NDS4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 AC055811.4-201ENST00000624039 1754 ntBASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 AC079178.1-201ENST00000420915 656 ntBASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 AC004898.1-201ENST00000451057 766 ntBASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 PPY2P-201ENST00000582808 702 ntBASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 AC244157.2-201ENST00000616239 1006 ntBASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 AC068587.10-201ENST00000641210 219 ntBASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 DOC2GP-204ENST00000639052 2548 ntBASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 REXO1L5P-201ENST00000622260 2098 ntBASIC15.5■□□□□ 0.07
TBC1D3BA6NDS4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 AP005117.1-202ENST00000581724 1908 ntBASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 NORAD-201ENST00000565493 5339 ntBASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms