Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC148477.4-201ENST00000613430 1793 ntBASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AL589987.1-201ENST00000453380 819 ntBASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AL450472.2-201ENST00000603663 1156 ntBASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.4□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL009178.2-201ENST00000597278 2719 ntBASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 OR8S1-201ENST00000310194 1080 ntBASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL512384.1-201ENST00000406683 331 ntBASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HIST3H2BA-201ENST00000436555 524 ntBASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 INE1-201ENST00000456273 945 ntBASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms