Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC026803.1-201ENST00000569130 274 ntBASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC138894.2-201ENST00000602838 371 ntBASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC009884.2-201ENST00000603110 324 ntBASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 MIR6842-201ENST00000612539 65 ntBASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 OR6D1P-203ENST00000641209 4860 ntBASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 RN7SL818P-201ENST00000485099 259 ntBASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 RN7SL67P-201ENST00000492147 296 ntBASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 RN7SL725P-201ENST00000606439 259 ntBASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 MEG3_2.1-201ENST00000611456 105 ntBASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 MIR6720-201ENST00000611664 98 ntBASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC102724428A0A0B4J2F2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 AL109837.1-201ENST00000603272 613 ntBASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LOC102724428A0A0B4J2F2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 PFN2-202ENST00000423691 911 ntTSL 2 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 RPL13AP19-201ENST00000434320 584 ntBASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 AL157813.1-201ENST00000612996 587 ntBASIC19.16■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC242376.2-201ENST00000619355 883 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms