Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 CTBP2P5-201ENST00000454986 1264 ntBASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 AC233724.13-201ENST00000598383 410 ntBASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 AL158212.4-201ENST00000624062 1286 ntBASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 AL133338.1-201ENST00000565695 1517 ntBASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 PDIA3P1-201ENST00000471856 1510 ntBASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHB1Q9Y5F3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms