Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 AP000842.3-202ENST00000569238 1080 ntBASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 AC005622.1-201ENST00000636801 1703 ntBASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.71■□□□□ 0.43
R3HCC1Q9Y3T6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
R3HCC1Q9Y3T6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.71■□□□□ 0.42
R3HCC1Q9Y3T6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
R3HCC1Q9Y3T6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
R3HCC1Q9Y3T6 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 TSEN15P1-201ENST00000423257 515 ntBASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 RBPMS2P1-201ENST00000437762 623 ntBASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 AC025678.2-201ENST00000562061 970 ntBASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 SPTSSB-204ENST00000617024 1292 ntBASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3HCC1Q9Y3T6 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 INTS4P1-203ENST00000641008 3683 ntBASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms