Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 AC105233.2-201ENST00000523697 349 ntBASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 AF228730.5-201ENST00000530288 346 ntBASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 AC073389.1-201ENST00000595595 795 ntBASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 AC117500.6-201ENST00000624871 588 ntBASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
KCNIP3Q9Y2W7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 FAM197Y8-203ENST00000450145 560 ntBASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms