Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RCE1Q9Y256 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.95□□□□□ -0.18
RCE1Q9Y256 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.95□□□□□ -0.18
RCE1Q9Y256 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RCE1Q9Y256 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RCE1Q9Y256 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RCE1Q9Y256 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.94□□□□□ -0.18
RCE1Q9Y256 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 AL133267.1-201ENST00000398220 340 ntBASIC13.94□□□□□ -0.18
RCE1Q9Y256 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 INGX-202ENST00000489074 768 ntBASIC13.94□□□□□ -0.18
RCE1Q9Y256 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 AC135586.1-201ENST00000539323 574 ntBASIC13.94□□□□□ -0.18
RCE1Q9Y256 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 AC008738.7-201ENST00000609744 511 ntBASIC13.94□□□□□ -0.18
RCE1Q9Y256 AC004461.2-201ENST00000629517 803 ntBASIC13.94□□□□□ -0.18
RCE1Q9Y256 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RCE1Q9Y256 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.94□□□□□ -0.18
RCE1Q9Y256 AC092127.1-201ENST00000567093 3455 ntBASIC13.94□□□□□ -0.18
RCE1Q9Y256 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 AC138969.3-201ENST00000546612 1459 ntBASIC13.93□□□□□ -0.18
RCE1Q9Y256 AC138932.2-201ENST00000548268 1459 ntBASIC13.93□□□□□ -0.18
RCE1Q9Y256 AC126755.4-201ENST00000549796 1459 ntBASIC13.93□□□□□ -0.18
RCE1Q9Y256 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 RPL5P21-201ENST00000404620 815 ntBASIC13.93□□□□□ -0.18
RCE1Q9Y256 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.93□□□□□ -0.18
RCE1Q9Y256 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 KRT18P43-201ENST00000469825 1281 ntBASIC13.93□□□□□ -0.18
RCE1Q9Y256 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 AC015910.1-201ENST00000579400 975 ntBASIC13.93□□□□□ -0.18
RCE1Q9Y256 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 AJ011932.1-201ENST00000621707 465 ntBASIC13.93□□□□□ -0.18
RCE1Q9Y256 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 AC232323.1-201ENST00000540724 2099 ntBASIC13.93□□□□□ -0.18
RCE1Q9Y256 REXO1L5P-201ENST00000622260 2098 ntBASIC13.93□□□□□ -0.18
RCE1Q9Y256 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RCE1Q9Y256 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RCE1Q9Y256 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms