Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 HECTD3-201ENST00000372168 2530 ntTSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 ARHGEF10-204ENST00000398564 5480 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 AL645937.6-201ENST00000641122 3727 ntBASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 AP000350.6-201ENST00000609510 5637 ntBASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PCDHGB8P-201ENST00000502926 1973 ntBASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 MYCLP1-201ENST00000372451 1075 ntBASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 AC133561.4-201ENST00000566112 224 ntBASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 CCDC92B-201ENST00000575506 885 ntBASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 TP53AIP1-206ENST00000602346 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 KRT8P47-201ENST00000604727 1398 ntBASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PCDHGB4-202ENST00000615384 4725 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 RAPGEF3-202ENST00000395358 4092 ntTSL 2 BASIC7.68□□□□□ -1.18
CDC42SE1Q9NRR8 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 PI4KAP2-201ENST00000360806 2080 ntBASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 GOLGA8IP-202ENST00000611635 2100 ntBASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms