Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 REXO1L4P-201ENST00000605109 1937 ntBASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AC015656.1-201ENST00000624209 3578 ntBASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AC022145.2-201ENST00000598203 171 ntBASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 MIR6069-201ENST00000620069 79 ntBASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 ELL2P1-201ENST00000413990 1906 ntBASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 Z97205.2-201ENST00000564697 1639 ntBASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 AC104457.1-201ENST00000401024 814 ntBASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 MIR940-201ENST00000401276 94 ntBASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 FAM58DP-201ENST00000428076 619 ntBASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 MTND6P24-201ENST00000440466 518 ntBASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE2Q9NRR3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms