Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 GK-202ENST00000378941 458 ntTSL 3 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 AC104457.1-201ENST00000401024 814 ntBASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 AC055876.3-201ENST00000431496 288 ntBASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 AC000095.1-201ENST00000603208 874 ntBASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 AC012645.4-201ENST00000610691 1061 ntBASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 AC138649.4-201ENST00000612222 287 ntBASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 AC004461.2-201ENST00000629517 803 ntBASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 REXO1L2P-201ENST00000425429 2069 ntBASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NEUROD4Q9HD90 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 MIR943-201ENST00000401286 94 ntBASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 AC005225.4-201ENST00000557330 545 ntBASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 AL844908.2-201ENST00000609461 460 ntBASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 BTBD7P1-201ENST00000447253 1453 ntBASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 AC007292.2-201ENST00000593524 1812 ntBASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NEUROD4Q9HD90 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms