Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.69□□□□□ -0.06
BRF2Q9HAW0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 AC093525.8-201ENST00000624099 1342 ntBASIC14.68□□□□□ -0.06
BRF2Q9HAW0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 PCDHA3-202ENST00000532566 4594 ntBASIC14.68□□□□□ -0.06
BRF2Q9HAW0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 AC093214.1-201ENST00000511688 1107 ntBASIC14.68□□□□□ -0.06
BRF2Q9HAW0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 RFPL4AP1-201ENST00000530883 850 ntBASIC14.68□□□□□ -0.06
BRF2Q9HAW0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 TPRX2P-201ENST00000535362 881 ntBASIC14.68□□□□□ -0.06
BRF2Q9HAW0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 GPALPP1-207ENST00000611650 899 ntBASIC14.68□□□□□ -0.06
BRF2Q9HAW0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 AC232323.1-201ENST00000540724 2099 ntBASIC14.68□□□□□ -0.06
BRF2Q9HAW0 REXO1L5P-201ENST00000622260 2098 ntBASIC14.68□□□□□ -0.06
BRF2Q9HAW0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
BRF2Q9HAW0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 AL353779.1-201ENST00000434793 351 ntBASIC14.67□□□□□ -0.06
BRF2Q9HAW0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 AC023310.3-201ENST00000557027 670 ntBASIC14.67□□□□□ -0.06
BRF2Q9HAW0 AC100756.1-201ENST00000562736 682 ntBASIC14.67□□□□□ -0.06
BRF2Q9HAW0 AC138749.3-201ENST00000567691 622 ntBASIC14.67□□□□□ -0.06
BRF2Q9HAW0 AC005498.2-205ENST00000593218 784 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms