Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC22CQ9BRL7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 AL450472.2-201ENST00000603663 1156 ntBASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 PMS2P7-201ENST00000506558 1336 ntBASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SEC22CQ9BRL7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 RPL5P21-201ENST00000404620 815 ntBASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 ACTL9-202ENST00000612068 1252 ntBASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC22CQ9BRL7 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms