Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 AC079140.1-201ENST00000508039 487 ntBASIC14.99□□□□□ -0.01
EBF4Q9BQW3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 FAM86C2P-203ENST00000528684 1004 ntBASIC14.99□□□□□ -0.01
EBF4Q9BQW3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 SLC25A39P2-201ENST00000537614 270 ntBASIC14.99□□□□□ -0.01
EBF4Q9BQW3 RARRES2P9-201ENST00000565168 469 ntBASIC14.99□□□□□ -0.01
EBF4Q9BQW3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 CICP17-201ENST00000418553 2377 ntBASIC14.99□□□□□ -0.01
EBF4Q9BQW3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 AC005252.3-201ENST00000623855 2258 ntBASIC14.99□□□□□ -0.01
EBF4Q9BQW3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 AC007787.1-201ENST00000588095 1583 ntBASIC14.98□□□□□ -0.01
EBF4Q9BQW3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 AC074338.1-201ENST00000416825 156 ntBASIC14.98□□□□□ -0.01
EBF4Q9BQW3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.98□□□□□ -0.01
EBF4Q9BQW3 MST1P2-201ENST00000457982 2291 ntBASIC14.97□□□□□ -0.01
EBF4Q9BQW3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms