Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TUBA1CQ9BQE3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 UGT1A2P-201ENST00000454886 866 ntBASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 HLA-V-204ENST00000476601 1289 ntBASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 AC061975.2-201ENST00000581722 295 ntBASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 AL589739.1-201ENST00000607720 493 ntBASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 AL590560.3-201ENST00000623350 461 ntBASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBA1CQ9BQE3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 CETN4P-206ENST00000642099 2168 ntBASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 AL928921.2-201ENST00000641325 2442 ntBASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TUBA1CQ9BQE3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms