Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMSS1Q9BQ75 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMSS1Q9BQ75 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
CMSS1Q9BQ75 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMSS1Q9BQ75 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMSS1Q9BQ75 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CMSS1Q9BQ75 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CMSS1Q9BQ75 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CMSS1Q9BQ75 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CMSS1Q9BQ75 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CMSS1Q9BQ75 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 AJ011931.1-201ENST00000618749 2492 ntBASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 WASH3P-207ENST00000560956 1394 ntBASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 FO538757.1-201ENST00000623083 1397 ntBASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 IL9RP2-201ENST00000423948 1312 ntBASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 MED15P5-201ENST00000423150 992 ntBASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 SPCS2P4-201ENST00000436160 681 ntBASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 KRT8P23-201ENST00000560090 1207 ntBASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 AC243562.1-201ENST00000560672 389 ntBASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 AC027601.4-201ENST00000611259 610 ntBASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 AC026120.1-201ENST00000611536 926 ntBASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CMSS1Q9BQ75 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 AC027601.5-201ENST00000624065 2482 ntBASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 AC136604.1-201ENST00000418535 575 ntBASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.21□□□□□ -0.29
CMSS1Q9BQ75 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms