Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 MIR940-201ENST00000401276 94 ntBASIC11.72□□□□□ -0.53
VGLL1Q99990 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
VGLL1Q99990 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
VGLL1Q99990 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.72□□□□□ -0.53
VGLL1Q99990 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.72□□□□□ -0.53
VGLL1Q99990 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.72□□□□□ -0.53
VGLL1Q99990 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.72□□□□□ -0.53
VGLL1Q99990 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 AC084121.4-201ENST00000641598 221 ntBASIC11.72□□□□□ -0.53
VGLL1Q99990 AF228730.8-201ENST00000642140 221 ntBASIC11.72□□□□□ -0.53
VGLL1Q99990 AC005840.4-201ENST00000541242 2494 ntBASIC11.72□□□□□ -0.53
VGLL1Q99990 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 AC117489.1-201ENST00000625169 3217 ntBASIC11.72□□□□□ -0.53
VGLL1Q99990 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
VGLL1Q99990 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.72□□□□□ -0.53
VGLL1Q99990 AC107918.4-201ENST00000641966 3141 ntBASIC11.72□□□□□ -0.53
VGLL1Q99990 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 ACE3P-201ENST00000423435 1973 ntBASIC11.72□□□□□ -0.53
VGLL1Q99990 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
VGLL1Q99990 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.71□□□□□ -0.53
VGLL1Q99990 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.71□□□□□ -0.53
VGLL1Q99990 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
VGLL1Q99990 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 AC140479.7-201ENST00000636301 2332 ntBASIC11.71□□□□□ -0.53
VGLL1Q99990 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.71□□□□□ -0.53
VGLL1Q99990 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
VGLL1Q99990 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
VGLL1Q99990 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.71□□□□□ -0.53
VGLL1Q99990 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.71□□□□□ -0.53
VGLL1Q99990 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
VGLL1Q99990 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.71□□□□□ -0.53
VGLL1Q99990 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 AL353705.2-201ENST00000428243 662 ntBASIC11.71□□□□□ -0.53
VGLL1Q99990 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.71□□□□□ -0.53
VGLL1Q99990 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
VGLL1Q99990 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.71□□□□□ -0.53
VGLL1Q99990 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.71□□□□□ -0.53
VGLL1Q99990 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.71□□□□□ -0.53
VGLL1Q99990 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
VGLL1Q99990 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
VGLL1Q99990 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.71□□□□□ -0.53
VGLL1Q99990 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VGLL1Q99990 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.71□□□□□ -0.54
VGLL1Q99990 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.71□□□□□ -0.54
VGLL1Q99990 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VGLL1Q99990 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
VGLL1Q99990 ST20-AS1-201ENST00000560255 4223 ntBASIC11.71□□□□□ -0.54
VGLL1Q99990 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VGLL1Q99990 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.71□□□□□ -0.54
VGLL1Q99990 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VGLL1Q99990 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VGLL1Q99990 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.71□□□□□ -0.54
VGLL1Q99990 CICP20-201ENST00000443330 2801 ntBASIC11.71□□□□□ -0.54
VGLL1Q99990 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
VGLL1Q99990 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
VGLL1Q99990 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VGLL1Q99990 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
VGLL1Q99990 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VGLL1Q99990 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
VGLL1Q99990 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.71□□□□□ -0.54
VGLL1Q99990 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VGLL1Q99990 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
VGLL1Q99990 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms