Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 KLF2P1-201ENST00000447438 1042 ntBASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 AC024681.1-201ENST00000521917 487 ntBASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 AC013355.1-201ENST00000562625 723 ntBASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 RN7SL163P-201ENST00000583100 276 ntBASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC3BQ96PB8 SHC1P1-201ENST00000425230 1745 ntBASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 AC010141.1-201ENST00000411585 623 ntBASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 RPL18P13-201ENST00000478088 569 ntBASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 AC134698.3-201ENST00000523880 214 ntBASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 FGFR3P5-201ENST00000564496 886 ntBASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 AL133499.1-201ENST00000596207 608 ntBASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 AC091544.8-201ENST00000619490 361 ntBASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LRRC3BQ96PB8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC3BQ96PB8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LRRC3BQ96PB8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC3BQ96PB8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LRRC3BQ96PB8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms