Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CASD1Q96PB1 AC011742.3-201ENST00000439053 820 ntBASIC16.17■□□□□ 0.18
CASD1Q96PB1 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.17■□□□□ 0.18
CASD1Q96PB1 Z97180.1-201ENST00000445173 988 ntBASIC16.17■□□□□ 0.18
CASD1Q96PB1 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.17■□□□□ 0.18
CASD1Q96PB1 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.17■□□□□ 0.18
CASD1Q96PB1 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASD1Q96PB1 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.17■□□□□ 0.18
CASD1Q96PB1 AC100827.2-201ENST00000563214 1194 ntBASIC16.17■□□□□ 0.18
CASD1Q96PB1 DUX4L46-201ENST00000566845 751 ntBASIC16.17■□□□□ 0.18
CASD1Q96PB1 RN7SL574P-201ENST00000581512 297 ntBASIC16.17■□□□□ 0.18
CASD1Q96PB1 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASD1Q96PB1 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.17■□□□□ 0.18
CASD1Q96PB1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASD1Q96PB1 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASD1Q96PB1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.17■□□□□ 0.18
CASD1Q96PB1 AC026691.1-201ENST00000602502 2017 ntBASIC16.17■□□□□ 0.18
CASD1Q96PB1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CASD1Q96PB1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.17■□□□□ 0.18
CASD1Q96PB1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CASD1Q96PB1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASD1Q96PB1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.17■□□□□ 0.18
CASD1Q96PB1 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CASD1Q96PB1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CASD1Q96PB1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CASD1Q96PB1 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 AC091046.1-201ENST00000331871 207 ntBASIC16.16■□□□□ 0.18
CASD1Q96PB1 MARK2P5-201ENST00000507649 634 ntBASIC16.16■□□□□ 0.18
CASD1Q96PB1 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 AC024681.1-201ENST00000521917 487 ntBASIC16.16■□□□□ 0.18
CASD1Q96PB1 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.16■□□□□ 0.18
CASD1Q96PB1 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASD1Q96PB1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 AL365203.3-201ENST00000609742 2057 ntBASIC16.15■□□□□ 0.18
CASD1Q96PB1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.15■□□□□ 0.18
CASD1Q96PB1 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.15■□□□□ 0.18
CASD1Q96PB1 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 AC099398.1-201ENST00000567919 2776 ntBASIC16.15■□□□□ 0.18
CASD1Q96PB1 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASD1Q96PB1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 AL138725.1-201ENST00000407347 1314 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms