Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 TEX28P1-201ENST00000613479 1221 ntBASIC11.15□□□□□ -0.62
C9orf85Q96MD7 TEX28P2-201ENST00000617764 1221 ntBASIC11.15□□□□□ -0.62
C9orf85Q96MD7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.15□□□□□ -0.62
C9orf85Q96MD7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
C9orf85Q96MD7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
C9orf85Q96MD7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.15□□□□□ -0.63
C9orf85Q96MD7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
C9orf85Q96MD7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
C9orf85Q96MD7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
C9orf85Q96MD7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.15□□□□□ -0.63
C9orf85Q96MD7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
C9orf85Q96MD7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
C9orf85Q96MD7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 BX640514.1-201ENST00000583223 1918 ntBASIC11.14□□□□□ -0.63
C9orf85Q96MD7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 AC211486.1-202ENST00000416371 468 ntBASIC11.14□□□□□ -0.63
C9orf85Q96MD7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 BX842568.4-201ENST00000421222 227 ntBASIC11.14□□□□□ -0.63
C9orf85Q96MD7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 AC211476.1-201ENST00000503899 468 ntBASIC11.14□□□□□ -0.63
C9orf85Q96MD7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 AC051619.7-201ENST00000568314 623 ntBASIC11.14□□□□□ -0.63
C9orf85Q96MD7 SAMD11P1-201ENST00000571429 661 ntBASIC11.14□□□□□ -0.63
C9orf85Q96MD7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 SPDYE12P-201ENST00000618416 771 ntBASIC11.14□□□□□ -0.63
C9orf85Q96MD7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 LILRP1-201ENST00000444199 1370 ntBASIC11.14□□□□□ -0.63
C9orf85Q96MD7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
C9orf85Q96MD7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.13□□□□□ -0.63
C9orf85Q96MD7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
C9orf85Q96MD7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
C9orf85Q96MD7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
C9orf85Q96MD7 AC113367.3-201ENST00000508316 1912 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms