Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.32■■□□□ 1
USP47Q96K76 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC21.32■■□□□ 1
USP47Q96K76 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.32■■□□□ 1
USP47Q96K76 AL354718.3-201ENST00000616414 581 ntBASIC21.32■■□□□ 1
USP47Q96K76 MIR6775-201ENST00000617557 69 ntBASIC21.32■■□□□ 1
USP47Q96K76 AC138951.2-201ENST00000623455 1161 ntBASIC21.32■■□□□ 1
USP47Q96K76 CR382287.1-201ENST00000623954 586 ntBASIC21.32■■□□□ 1
USP47Q96K76 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC21.32■■□□□ 1
USP47Q96K76 AJ011931.1-201ENST00000618749 2492 ntBASIC21.31■■□□□ 1
USP47Q96K76 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC21.31■■□□□ 1
USP47Q96K76 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
USP47Q96K76 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
USP47Q96K76 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC21.31■■□□□ 1
USP47Q96K76 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC21.31■■□□□ 1
USP47Q96K76 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.31■■□□□ 1
USP47Q96K76 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 AC245100.3-201ENST00000441281 285 ntBASIC21.31■■□□□ 1
USP47Q96K76 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.31■■□□□ 1
USP47Q96K76 MIR4259-201ENST00000584466 101 ntBASIC21.31■■□□□ 1
USP47Q96K76 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
USP47Q96K76 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC21.31■■□□□ 1
USP47Q96K76 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP47Q96K76 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC21.31■■□□□ 1
USP47Q96K76 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC21.3■■□□□ 1
USP47Q96K76 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC21.3■■□□□ 1
USP47Q96K76 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
USP47Q96K76 POR-201ENST00000394893 2532 ntTSL 5 BASIC21.3■■□□□ 1
USP47Q96K76 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC21.3■■□□□ 1
USP47Q96K76 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC21.3■■□□□ 1
USP47Q96K76 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC21.3■■□□□ 1
USP47Q96K76 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC21.3■■□□□ 1
USP47Q96K76 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.3■■□□□ 1
USP47Q96K76 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.3■■□□□ 1
USP47Q96K76 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.3■■□□□ 1
USP47Q96K76 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.3■■□□□ 1
USP47Q96K76 AC011270.2-201ENST00000624293 2550 ntBASIC21.3■■□□□ 1
USP47Q96K76 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.3■■□□□ 1
USP47Q96K76 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
USP47Q96K76 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC21.3■■□□□ 1
USP47Q96K76 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP47Q96K76 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC21.29■■□□□ 1
USP47Q96K76 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
USP47Q96K76 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC21.29■■□□□ 1
USP47Q96K76 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC21.29■■□□□ 1
USP47Q96K76 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
USP47Q96K76 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC21.29■■□□□ 1
USP47Q96K76 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.29■■□□□ 1
USP47Q96K76 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP47Q96K76 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC21.29■■□□□ 1
USP47Q96K76 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC21.29■■□□□ 1
USP47Q96K76 RPS15-202ENST00000585665 467 ntTSL 3 BASIC21.29■■□□□ 1
USP47Q96K76 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms