Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ECHDC3Q96DC8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 ATP5G2P4-201ENST00000442175 420 ntBASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 MIR6775-201ENST00000617557 69 ntBASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 AC104640.1-201ENST00000562617 2109 ntBASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ECHDC3Q96DC8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 AL137783.1-201ENST00000623494 1896 ntBASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 LILRP1-201ENST00000444199 1370 ntBASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 AC104989.1-201ENST00000519711 778 ntBASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 MIR6805-201ENST00000615055 62 ntBASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.27■□□□□ 0.04
ECHDC3Q96DC8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ECHDC3Q96DC8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ECHDC3Q96DC8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ECHDC3Q96DC8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.27■□□□□ 0.03
ECHDC3Q96DC8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.27■□□□□ 0.03
ECHDC3Q96DC8 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.27■□□□□ 0.03
ECHDC3Q96DC8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.27■□□□□ 0.03
ECHDC3Q96DC8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms