Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.22□□□□□ -0.13
HPS1Q92902 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.22□□□□□ -0.13
HPS1Q92902 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.22□□□□□ -0.13
HPS1Q92902 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.22□□□□□ -0.13
HPS1Q92902 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.22□□□□□ -0.13
HPS1Q92902 MPDU1-223ENST00000582151 728 ntBASIC14.22□□□□□ -0.13
HPS1Q92902 MIR4515-201ENST00000584082 81 ntBASIC14.22□□□□□ -0.13
HPS1Q92902 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 ACTL9-202ENST00000612068 1252 ntBASIC14.22□□□□□ -0.13
HPS1Q92902 AL513210.1-201ENST00000629608 234 ntBASIC14.22□□□□□ -0.13
HPS1Q92902 AC092902.6-201ENST00000641783 218 ntBASIC14.22□□□□□ -0.13
HPS1Q92902 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HPS1Q92902 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.22□□□□□ -0.13
HPS1Q92902 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HPS1Q92902 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.21□□□□□ -0.13
HPS1Q92902 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.21□□□□□ -0.13
HPS1Q92902 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.21□□□□□ -0.13
HPS1Q92902 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.21□□□□□ -0.13
HPS1Q92902 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.21□□□□□ -0.13
HPS1Q92902 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.21□□□□□ -0.13
HPS1Q92902 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.21□□□□□ -0.13
HPS1Q92902 TSEN15P1-201ENST00000423257 515 ntBASIC14.21□□□□□ -0.13
HPS1Q92902 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.21□□□□□ -0.13
HPS1Q92902 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
HPS1Q92902 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.21□□□□□ -0.13
HPS1Q92902 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.21□□□□□ -0.13
HPS1Q92902 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HPS1Q92902 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.21□□□□□ -0.13
HPS1Q92902 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.21□□□□□ -0.13
HPS1Q92902 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.21□□□□□ -0.13
HPS1Q92902 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HPS1Q92902 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HPS1Q92902 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HPS1Q92902 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.21□□□□□ -0.14
HPS1Q92902 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HPS1Q92902 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HPS1Q92902 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
HPS1Q92902 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
HPS1Q92902 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.21□□□□□ -0.14
HPS1Q92902 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.21□□□□□ -0.14
HPS1Q92902 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HPS1Q92902 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HPS1Q92902 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HPS1Q92902 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.21□□□□□ -0.14
HPS1Q92902 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HPS1Q92902 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms