Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
ERCC4Q92889 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
ERCC4Q92889 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC4Q92889 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.48■□□□□ 0.39
ERCC4Q92889 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ERCC4Q92889 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC4Q92889 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC4Q92889 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC4Q92889 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 AL079307.3-201ENST00000556114 283 ntBASIC17.48■□□□□ 0.39
ERCC4Q92889 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.48■□□□□ 0.39
ERCC4Q92889 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.48■□□□□ 0.39
ERCC4Q92889 AC007967.4-201ENST00000614700 386 ntBASIC17.48■□□□□ 0.39
ERCC4Q92889 MIR6080-201ENST00000617359 66 ntBASIC17.48■□□□□ 0.39
ERCC4Q92889 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC4Q92889 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ERCC4Q92889 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
ERCC4Q92889 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ERCC4Q92889 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC4Q92889 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC4Q92889 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC4Q92889 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC4Q92889 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC4Q92889 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ERCC4Q92889 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.47■□□□□ 0.39
ERCC4Q92889 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ERCC4Q92889 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
ERCC4Q92889 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 FO393414.2-201ENST00000405153 598 ntBASIC17.47■□□□□ 0.39
ERCC4Q92889 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.47■□□□□ 0.39
ERCC4Q92889 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC4Q92889 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC4Q92889 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC4Q92889 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
ERCC4Q92889 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC4Q92889 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ERCC4Q92889 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.47■□□□□ 0.39
ERCC4Q92889 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ERCC4Q92889 CICP4-201ENST00000447359 2812 ntBASIC17.47■□□□□ 0.39
ERCC4Q92889 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC4Q92889 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
ERCC4Q92889 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC4Q92889 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC4Q92889 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC4Q92889 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ERCC4Q92889 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC4Q92889 AC138969.2-201ENST00000532739 9932 ntBASIC17.46■□□□□ 0.39
ERCC4Q92889 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
ERCC4Q92889 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC4Q92889 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC4Q92889 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC4Q92889 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC4Q92889 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC4Q92889 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ERCC4Q92889 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC4Q92889 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC4Q92889 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ERCC4Q92889 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC4Q92889 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC4Q92889 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC4Q92889 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC4Q92889 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.46■□□□□ 0.39
ERCC4Q92889 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC4Q92889 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC4Q92889 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC4Q92889 KRT18P13-201ENST00000400056 1290 ntBASIC17.46■□□□□ 0.39
ERCC4Q92889 BX842568.4-201ENST00000421222 227 ntBASIC17.46■□□□□ 0.39
ERCC4Q92889 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms