Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RPGRQ92834 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPGRQ92834 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RPGRQ92834 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.72■□□□□ 0.59
RPGRQ92834 AC006449.5-201ENST00000610658 2098 ntBASIC18.72■□□□□ 0.59
RPGRQ92834 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.72■□□□□ 0.59
RPGRQ92834 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
RPGRQ92834 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
RPGRQ92834 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RPGRQ92834 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.72■□□□□ 0.59
RPGRQ92834 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.72■□□□□ 0.59
RPGRQ92834 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.72■□□□□ 0.59
RPGRQ92834 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.72■□□□□ 0.59
RPGRQ92834 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 AL133499.1-201ENST00000596207 608 ntBASIC18.72■□□□□ 0.59
RPGRQ92834 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.72■□□□□ 0.59
RPGRQ92834 AC068587.8-201ENST00000641239 219 ntBASIC18.72■□□□□ 0.59
RPGRQ92834 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RPGRQ92834 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.72■□□□□ 0.59
RPGRQ92834 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPGRQ92834 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
RPGRQ92834 AL360270.3-201ENST00000609118 1348 ntBASIC18.72■□□□□ 0.59
RPGRQ92834 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.72■□□□□ 0.59
RPGRQ92834 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.71■□□□□ 0.59
RPGRQ92834 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RPGRQ92834 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.71■□□□□ 0.59
RPGRQ92834 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
RPGRQ92834 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.71■□□□□ 0.59
RPGRQ92834 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.71■□□□□ 0.59
RPGRQ92834 MARK2P5-201ENST00000507649 634 ntBASIC18.71■□□□□ 0.59
RPGRQ92834 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.71■□□□□ 0.59
RPGRQ92834 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.71■□□□□ 0.59
RPGRQ92834 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
RPGRQ92834 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.71■□□□□ 0.59
RPGRQ92834 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.71■□□□□ 0.59
RPGRQ92834 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.71■□□□□ 0.59
RPGRQ92834 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.71■□□□□ 0.59
RPGRQ92834 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.71■□□□□ 0.59
RPGRQ92834 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.71■□□□□ 0.59
RPGRQ92834 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.71■□□□□ 0.59
RPGRQ92834 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPGRQ92834 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RPGRQ92834 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RPGRQ92834 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
RPGRQ92834 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.7■□□□□ 0.58
RPGRQ92834 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RPGRQ92834 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.7■□□□□ 0.58
RPGRQ92834 MST1L-201ENST00000442552 2185 ntBASIC18.7■□□□□ 0.58
RPGRQ92834 AL596276.2-201ENST00000447525 331 ntBASIC18.7■□□□□ 0.58
RPGRQ92834 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms