Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAF3IP1Q8TDR0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 ZBED1P1-201ENST00000502364 1930 ntBASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 ZNF890P-202ENST00000530367 1156 ntBASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 DUX4L27-201ENST00000554796 1261 ntBASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAF3IP1Q8TDR0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 AC138969.2-201ENST00000532739 9932 ntBASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 GHSR-202ENST00000427970 912 ntBASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms