Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.6□□□□□ -0.23
DNAAF1Q8NEP3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
DNAAF1Q8NEP3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DNAAF1Q8NEP3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
DNAAF1Q8NEP3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DNAAF1Q8NEP3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DNAAF1Q8NEP3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DNAAF1Q8NEP3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DNAAF1Q8NEP3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
DNAAF1Q8NEP3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
DNAAF1Q8NEP3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 AL607033.1-201ENST00000623900 1599 ntBASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 MIR940-201ENST00000401276 94 ntBASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 ACE3P-201ENST00000423435 1973 ntBASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.59□□□□□ -0.23
DNAAF1Q8NEP3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
DNAAF1Q8NEP3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
DNAAF1Q8NEP3 ELL2P1-201ENST00000413990 1906 ntBASIC13.58□□□□□ -0.23
DNAAF1Q8NEP3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
DNAAF1Q8NEP3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.58□□□□□ -0.23
DNAAF1Q8NEP3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.58□□□□□ -0.23
DNAAF1Q8NEP3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
DNAAF1Q8NEP3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
DNAAF1Q8NEP3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 AL353705.2-201ENST00000428243 662 ntBASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 AL137784.3-201ENST00000623858 2288 ntBASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
DNAAF1Q8NEP3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms