Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 AC026150.2-201ENST00000564693 1156 ntBASIC12.86□□□□□ -0.35
COMMD1Q8N668 AC024267.1-201ENST00000582320 895 ntBASIC12.86□□□□□ -0.35
COMMD1Q8N668 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 AL355385.1-201ENST00000606123 409 ntBASIC12.86□□□□□ -0.35
COMMD1Q8N668 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 SPTSSB-204ENST00000617024 1292 ntBASIC12.86□□□□□ -0.35
COMMD1Q8N668 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 AL122018.1-201ENST00000446607 2310 ntBASIC12.86□□□□□ -0.35
COMMD1Q8N668 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.86□□□□□ -0.35
COMMD1Q8N668 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COMMD1Q8N668 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
COMMD1Q8N668 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 AC117489.1-201ENST00000625169 3217 ntBASIC12.85□□□□□ -0.35
COMMD1Q8N668 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 AC073439.1-201ENST00000624121 1774 ntBASIC12.85□□□□□ -0.35
COMMD1Q8N668 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 FAM220BP-201ENST00000377689 816 ntBASIC12.85□□□□□ -0.35
COMMD1Q8N668 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 GPS2P2-201ENST00000430745 888 ntBASIC12.85□□□□□ -0.35
COMMD1Q8N668 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 KLF2P3-201ENST00000451977 1087 ntBASIC12.85□□□□□ -0.35
COMMD1Q8N668 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 Z92544.3-201ENST00000624747 417 ntBASIC12.85□□□□□ -0.35
COMMD1Q8N668 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 AC011477.6-201ENST00000604980 1927 ntBASIC12.85□□□□□ -0.35
COMMD1Q8N668 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 TUBB3P1-201ENST00000405796 1332 ntBASIC12.85□□□□□ -0.35
COMMD1Q8N668 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
COMMD1Q8N668 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms