Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 AC015936.2-201ENST00000593177 259 ntBASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 AP005482.1-201ENST00000563722 1273 ntBASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 BTNL10-201ENST00000595971 695 ntBASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 AL158212.4-201ENST00000624062 1286 ntBASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC33Q8N5R6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC33Q8N5R6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC33Q8N5R6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
CCDC33Q8N5R6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC33Q8N5R6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC33Q8N5R6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AC006486.2-201ENST00000624246 2199 ntBASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 CICP11-201ENST00000434745 2827 ntBASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 KRT8P22-201ENST00000562317 1415 ntBASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 ANKRD19P-201ENST00000338192 862 ntBASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AC092658.1-201ENST00000505836 891 ntBASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms