Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 LINC00554-201ENST00000564841 3011 ntBASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 KRT43P-201ENST00000434019 910 ntBASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 HILS1-202ENST00000545329 423 ntBASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 AC144831.1-201ENST00000573312 2656 ntBASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C9orf40Q8IXQ3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 EIF3FP3-201ENST00000434851 1086 ntBASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 GPR53P-205ENST00000457298 1084 ntBASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 FTH1P14-201ENST00000482930 551 ntBASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 RAB43P1-201ENST00000561790 589 ntBASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 AL512343.1-201ENST00000605837 169 ntBASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms