Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 KRT90P-201ENST00000549264 1064 ntBASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 ACTBP8-201ENST00000403258 1108 ntBASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 AL139094.1-201ENST00000405549 1188 ntBASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 CSF2RBP1-201ENST00000447905 391 ntBASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 AL645728.2-202ENST00000641679 227 ntBASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN4BQ8IWT1 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 FAM197Y7-201ENST00000432892 766 ntBASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 RHOXF1P1-202ENST00000635473 501 ntBASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 PRSS30P-206ENST00000641773 873 ntBASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms