Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 GPALPP1-207ENST00000611650 899 ntBASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 AC093512.1-201ENST00000617969 520 ntBASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 AL390754.1-201ENST00000619088 582 ntBASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 AL158212.4-201ENST00000624062 1286 ntBASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST2H3AQ71DI3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 MRPS18AP1-201ENST00000414458 589 ntBASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 FAM8A3P-201ENST00000427218 844 ntBASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST2H3AQ71DI3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 LINC01101-201ENST00000622953 1884 ntBASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms