Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 AC023310.3-201ENST00000557027 670 ntBASIC17.29■□□□□ 0.36
SHC4Q6S5L8 AC100756.1-201ENST00000562736 682 ntBASIC17.29■□□□□ 0.36
SHC4Q6S5L8 RARRES2P5-201ENST00000564013 466 ntBASIC17.29■□□□□ 0.36
SHC4Q6S5L8 AC138749.3-201ENST00000567691 622 ntBASIC17.29■□□□□ 0.36
SHC4Q6S5L8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 AC116165.1-201ENST00000611806 668 ntBASIC17.29■□□□□ 0.36
SHC4Q6S5L8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 AC113367.3-201ENST00000508316 1912 ntBASIC17.28■□□□□ 0.36
SHC4Q6S5L8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.28■□□□□ 0.36
SHC4Q6S5L8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 FAM86LP-201ENST00000478302 853 ntBASIC17.28■□□□□ 0.36
SHC4Q6S5L8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 AC026410.3-201ENST00000514280 936 ntBASIC17.28■□□□□ 0.36
SHC4Q6S5L8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC4Q6S5L8 NORAD-201ENST00000565493 5339 ntBASIC17.28■□□□□ 0.36
SHC4Q6S5L8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 AL353779.1-201ENST00000434793 351 ntBASIC17.27■□□□□ 0.36
SHC4Q6S5L8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 AC107373.2-201ENST00000607735 490 ntBASIC17.27■□□□□ 0.36
SHC4Q6S5L8 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.27■□□□□ 0.36
SHC4Q6S5L8 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.27■□□□□ 0.36
SHC4Q6S5L8 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.27■□□□□ 0.36
SHC4Q6S5L8 AC106028.4-201ENST00000614509 607 ntBASIC17.27■□□□□ 0.36
SHC4Q6S5L8 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.27■□□□□ 0.36
SHC4Q6S5L8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SHC4Q6S5L8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC4Q6S5L8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms