Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MIR3188-201ENST00000583494 85 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 LTB4R2-202ENST00000528054 3092 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 KRT17P5-201ENST00000332088 839 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC010234.1-201ENST00000494599 870 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC012508.2-201ENST00000567613 1472 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 RN7SKP109-201ENST00000410592 316 ntBASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 KRT18P36-201ENST00000411618 1276 ntBASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 XBP1P1-201ENST00000436573 652 ntBASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 CICP12-201ENST00000455801 843 ntBASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 AL118516.1-201ENST00000564152 670 ntBASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 AC020916.1-201ENST00000587762 1774 ntBASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 TLE1P1-201ENST00000422965 589 ntBASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 MIR2392-201ENST00000584881 84 ntBASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 DGAT2L7P-201ENST00000602462 744 ntBASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13DQ5THJ4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 AC093826.1-201ENST00000508655 993 ntBASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms