Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KHDC1Q4VXA5 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
KHDC1Q4VXA5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KHDC1Q4VXA5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.61■□□□□ 0.09
KHDC1Q4VXA5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KHDC1Q4VXA5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 SPDYE19P-201ENST00000338590 713 ntBASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 DOC2GP-202ENST00000514950 1163 ntBASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 AC023310.3-201ENST00000557027 670 ntBASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 AC100756.1-201ENST00000562736 682 ntBASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 AC138749.3-201ENST00000567691 622 ntBASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 MIR3197-201ENST00000582241 73 ntBASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 AC116165.1-201ENST00000611806 668 ntBASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KHDC1Q4VXA5 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 AC010327.5-201ENST00000586923 3061 ntBASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 SLED1-202ENST00000512051 380 ntBASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 AC138761.1-201ENST00000584393 385 ntBASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 AJ011931.1-201ENST00000618749 2492 ntBASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KHDC1Q4VXA5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms