Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 AC138969.2-201ENST00000532739 9932 ntBASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC6LQ2NKX8 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 AC073621.1-201ENST00000392730 636 ntBASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 GHSR-202ENST00000427970 912 ntBASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 FOSL1P1-201ENST00000511041 816 ntBASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 AC025062.2-201ENST00000605477 670 ntBASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 AC118758.2-201ENST00000614242 2813 ntBASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC6LQ2NKX8 AC015909.5-201ENST00000624336 2266 ntBASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 IGHV3-65-201ENST00000523210 341 ntBASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 AL121772.3-201ENST00000610840 674 ntBASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 AC016397.2-201ENST00000624848 1985 ntBASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC6LQ2NKX8 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms