Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FOXC1Q12948 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXC1Q12948 AC022762.2-201ENST00000600308 1353 ntBASIC14.33□□□□□ -0.12
FOXC1Q12948 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FOXC1Q12948 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
FOXC1Q12948 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXC1Q12948 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXC1Q12948 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXC1Q12948 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXC1Q12948 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXC1Q12948 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXC1Q12948 RN7SKP175-201ENST00000408472 289 ntBASIC14.32□□□□□ -0.12
FOXC1Q12948 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 KLF2P1-201ENST00000447438 1042 ntBASIC14.32□□□□□ -0.12
FOXC1Q12948 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXC1Q12948 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
FOXC1Q12948 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXC1Q12948 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXC1Q12948 AC093752.3-201ENST00000567343 901 ntBASIC14.32□□□□□ -0.12
FOXC1Q12948 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.32□□□□□ -0.12
FOXC1Q12948 AC005962.1-201ENST00000584100 773 ntBASIC14.32□□□□□ -0.12
FOXC1Q12948 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
FOXC1Q12948 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXC1Q12948 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
FOXC1Q12948 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXC1Q12948 AC027348.2-201ENST00000624375 642 ntBASIC14.32□□□□□ -0.12
FOXC1Q12948 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 AC078925.2-201ENST00000624013 1973 ntBASIC14.32□□□□□ -0.12
FOXC1Q12948 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXC1Q12948 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
FOXC1Q12948 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXC1Q12948 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXC1Q12948 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXC1Q12948 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXC1Q12948 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
FOXC1Q12948 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXC1Q12948 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXC1Q12948 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXC1Q12948 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FOXC1Q12948 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
FOXC1Q12948 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXC1Q12948 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FOXC1Q12948 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXC1Q12948 AC040160.2-201ENST00000623816 1675 ntBASIC14.31□□□□□ -0.12
FOXC1Q12948 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.31□□□□□ -0.12
FOXC1Q12948 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 HIST2H2BA-201ENST00000412169 381 ntBASIC14.31□□□□□ -0.12
FOXC1Q12948 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.31□□□□□ -0.12
FOXC1Q12948 AC078875.1-201ENST00000431907 724 ntBASIC14.31□□□□□ -0.12
FOXC1Q12948 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC14.31□□□□□ -0.12
FOXC1Q12948 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
FOXC1Q12948 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.31□□□□□ -0.12
FOXC1Q12948 AC084752.1-201ENST00000509766 622 ntBASIC14.31□□□□□ -0.12
FOXC1Q12948 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXC1Q12948 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXC1Q12948 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXC1Q12948 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
FOXC1Q12948 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC14.31□□□□□ -0.12
FOXC1Q12948 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXC1Q12948 MIR4472-1-201ENST00000584349 80 ntBASIC14.31□□□□□ -0.12
FOXC1Q12948 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXC1Q12948 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 AC092953.2-201ENST00000608000 699 ntBASIC14.31□□□□□ -0.12
FOXC1Q12948 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
FOXC1Q12948 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXC1Q12948 AC244250.3-201ENST00000620749 366 ntBASIC14.31□□□□□ -0.12
FOXC1Q12948 AC073592.2-201ENST00000623062 780 ntBASIC14.31□□□□□ -0.12
FOXC1Q12948 MME-218ENST00000625667 363 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXC1Q12948 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXC1Q12948 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
FOXC1Q12948 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
FOXC1Q12948 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXC1Q12948 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms