Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL16A1Q07092 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC19.94■□□□□ 0.78
COL16A1Q07092 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
COL16A1Q07092 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
COL16A1Q07092 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL16A1Q07092 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 GEMIN8P4-201ENST00000380526 729 ntBASIC19.94■□□□□ 0.78
COL16A1Q07092 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC19.94■□□□□ 0.78
COL16A1Q07092 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL16A1Q07092 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC19.94■□□□□ 0.78
COL16A1Q07092 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC19.94■□□□□ 0.78
COL16A1Q07092 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC19.94■□□□□ 0.78
COL16A1Q07092 AC131206.1-201ENST00000538078 1211 ntBASIC19.94■□□□□ 0.78
COL16A1Q07092 AC068831.5-201ENST00000557387 328 ntBASIC19.94■□□□□ 0.78
COL16A1Q07092 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC19.94■□□□□ 0.78
COL16A1Q07092 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC19.94■□□□□ 0.78
COL16A1Q07092 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 HELLS-212ENST00000630929 400 ntTSL 5 BASIC19.94■□□□□ 0.78
COL16A1Q07092 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.94■□□□□ 0.78
COL16A1Q07092 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL16A1Q07092 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.93■□□□□ 0.78
COL16A1Q07092 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL16A1Q07092 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL16A1Q07092 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL16A1Q07092 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 NHP2P1-201ENST00000335274 462 ntBASIC19.93■□□□□ 0.78
COL16A1Q07092 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC19.93■□□□□ 0.78
COL16A1Q07092 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC19.93■□□□□ 0.78
COL16A1Q07092 AL035414.1-201ENST00000451327 857 ntBASIC19.93■□□□□ 0.78
COL16A1Q07092 HIST1H2APS2-201ENST00000454426 370 ntBASIC19.93■□□□□ 0.78
COL16A1Q07092 BPIFB5P-201ENST00000457066 1099 ntBASIC19.93■□□□□ 0.78
COL16A1Q07092 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL16A1Q07092 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL16A1Q07092 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
COL16A1Q07092 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC19.93■□□□□ 0.78
COL16A1Q07092 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC19.93■□□□□ 0.78
COL16A1Q07092 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC19.93■□□□□ 0.78
COL16A1Q07092 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC19.93■□□□□ 0.78
COL16A1Q07092 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.93■□□□□ 0.78
COL16A1Q07092 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
COL16A1Q07092 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.93■□□□□ 0.78
COL16A1Q07092 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL16A1Q07092 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.93■□□□□ 0.78
COL16A1Q07092 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COL16A1Q07092 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL16A1Q07092 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
COL16A1Q07092 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL16A1Q07092 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.92■□□□□ 0.78
COL16A1Q07092 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.92■□□□□ 0.78
COL16A1Q07092 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL16A1Q07092 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC19.92■□□□□ 0.78
COL16A1Q07092 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.92■□□□□ 0.78
COL16A1Q07092 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC19.92■□□□□ 0.78
COL16A1Q07092 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL16A1Q07092 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC19.92■□□□□ 0.78
COL16A1Q07092 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC19.92■□□□□ 0.78
COL16A1Q07092 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.92■□□□□ 0.78
COL16A1Q07092 AC110057.1-201ENST00000636031 898 ntBASIC19.92■□□□□ 0.78
COL16A1Q07092 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL16A1Q07092 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL16A1Q07092 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL16A1Q07092 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL16A1Q07092 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL16A1Q07092 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL16A1Q07092 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.92■□□□□ 0.78
COL16A1Q07092 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.92■□□□□ 0.78
COL16A1Q07092 AC009090.5-201ENST00000624886 2285 ntBASIC19.92■□□□□ 0.78
COL16A1Q07092 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 RNLS-203ENST00000437752 525 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL16A1Q07092 RNA5SP406-201ENST00000516106 112 ntBASIC19.91■□□□□ 0.78
COL16A1Q07092 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
COL16A1Q07092 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
COL16A1Q07092 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL16A1Q07092 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL16A1Q07092 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC19.91■□□□□ 0.78
COL16A1Q07092 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms