Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LTBQ06643 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.07□□□□□ -0.16
LTBQ06643 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LTBQ06643 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.07□□□□□ -0.16
LTBQ06643 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.07□□□□□ -0.16
LTBQ06643 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LTBQ06643 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LTBQ06643 MRPS18AP1-201ENST00000414458 589 ntBASIC14.07□□□□□ -0.16
LTBQ06643 TOMM22P5-201ENST00000416399 439 ntBASIC14.07□□□□□ -0.16
LTBQ06643 GIMAP3P-201ENST00000495150 836 ntBASIC14.07□□□□□ -0.16
LTBQ06643 AC092658.1-201ENST00000505836 891 ntBASIC14.07□□□□□ -0.16
LTBQ06643 SDHAP3-202ENST00000515467 728 ntBASIC14.07□□□□□ -0.16
LTBQ06643 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.07□□□□□ -0.16
LTBQ06643 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.07□□□□□ -0.16
LTBQ06643 AC074044.1-201ENST00000609673 707 ntBASIC14.07□□□□□ -0.16
LTBQ06643 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.07□□□□□ -0.16
LTBQ06643 MIR6805-201ENST00000615055 62 ntBASIC14.07□□□□□ -0.16
LTBQ06643 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
LTBQ06643 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LTBQ06643 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.07□□□□□ -0.16
LTBQ06643 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
LTBQ06643 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LTBQ06643 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LTBQ06643 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LTBQ06643 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LTBQ06643 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.06□□□□□ -0.16
LTBQ06643 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 LINC00528-201ENST00000600723 2160 ntBASIC14.06□□□□□ -0.16
LTBQ06643 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LTBQ06643 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.06□□□□□ -0.16
LTBQ06643 MYO15B-237ENST00000642007 4893 ntBASIC14.06□□□□□ -0.16
LTBQ06643 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LTBQ06643 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LTBQ06643 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 RPL5P21-201ENST00000404620 815 ntBASIC14.06□□□□□ -0.16
LTBQ06643 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBQ06643 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBQ06643 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBQ06643 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBQ06643 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBQ06643 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.06□□□□□ -0.16
LTBQ06643 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBQ06643 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.06□□□□□ -0.16
LTBQ06643 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBQ06643 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.06□□□□□ -0.16
LTBQ06643 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
LTBQ06643 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 OR2I1P-209ENST00000641730 5365 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms