Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.4■□□□□ 0.22
CDR2Q01850 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CDR2Q01850 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.4■□□□□ 0.22
CDR2Q01850 RARRES2P5-201ENST00000564013 466 ntBASIC16.4■□□□□ 0.22
CDR2Q01850 SAMD11P1-201ENST00000571429 661 ntBASIC16.4■□□□□ 0.22
CDR2Q01850 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.4■□□□□ 0.22
CDR2Q01850 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CDR2Q01850 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.4■□□□□ 0.22
CDR2Q01850 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDR2Q01850 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDR2Q01850 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 AL359258.3-201ENST00000622910 2331 ntBASIC16.4■□□□□ 0.22
CDR2Q01850 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
CDR2Q01850 AL009178.2-201ENST00000597278 2719 ntBASIC16.39■□□□□ 0.22
CDR2Q01850 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDR2Q01850 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDR2Q01850 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDR2Q01850 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.39■□□□□ 0.21
CDR2Q01850 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDR2Q01850 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDR2Q01850 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CDR2Q01850 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.39■□□□□ 0.21
CDR2Q01850 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 AC093214.1-201ENST00000511688 1107 ntBASIC16.39■□□□□ 0.21
CDR2Q01850 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.39■□□□□ 0.21
CDR2Q01850 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.39■□□□□ 0.21
CDR2Q01850 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.39■□□□□ 0.21
CDR2Q01850 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.39■□□□□ 0.21
CDR2Q01850 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.39■□□□□ 0.21
CDR2Q01850 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.39■□□□□ 0.21
CDR2Q01850 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.39■□□□□ 0.21
CDR2Q01850 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.39■□□□□ 0.21
CDR2Q01850 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.39■□□□□ 0.21
CDR2Q01850 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.39■□□□□ 0.21
CDR2Q01850 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.39■□□□□ 0.21
CDR2Q01850 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDR2Q01850 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.39■□□□□ 0.21
CDR2Q01850 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDR2Q01850 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDR2Q01850 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDR2Q01850 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.38■□□□□ 0.21
CDR2Q01850 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDR2Q01850 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CDR2Q01850 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.38■□□□□ 0.21
CDR2Q01850 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDR2Q01850 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDR2Q01850 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.38■□□□□ 0.21
CDR2Q01850 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.38■□□□□ 0.21
CDR2Q01850 PMS2P2-201ENST00000425039 1128 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms