Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.54□□□□□ -0.08
RAE1P78406 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.54□□□□□ -0.08
RAE1P78406 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.54□□□□□ -0.08
RAE1P78406 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.54□□□□□ -0.08
RAE1P78406 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.54□□□□□ -0.08
RAE1P78406 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 BRI3BPP1-201ENST00000594224 787 ntBASIC14.54□□□□□ -0.08
RAE1P78406 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.54□□□□□ -0.08
RAE1P78406 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.54□□□□□ -0.08
RAE1P78406 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
RAE1P78406 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RAE1P78406 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAE1P78406 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
RAE1P78406 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.53□□□□□ -0.08
RAE1P78406 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAE1P78406 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.53□□□□□ -0.08
RAE1P78406 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.53□□□□□ -0.08
RAE1P78406 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RAE1P78406 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.53□□□□□ -0.08
RAE1P78406 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAE1P78406 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.53□□□□□ -0.08
RAE1P78406 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RAE1P78406 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.53□□□□□ -0.08
RAE1P78406 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAE1P78406 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.53□□□□□ -0.08
RAE1P78406 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
RAE1P78406 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAE1P78406 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.53□□□□□ -0.08
RAE1P78406 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
RAE1P78406 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAE1P78406 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.53□□□□□ -0.08
RAE1P78406 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.53□□□□□ -0.08
RAE1P78406 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAE1P78406 AC026748.1-201ENST00000624349 3251 ntBASIC14.53□□□□□ -0.08
RAE1P78406 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAE1P78406 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RAE1P78406 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
RAE1P78406 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.52□□□□□ -0.08
RAE1P78406 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAE1P78406 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAE1P78406 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RAE1P78406 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.52□□□□□ -0.08
RAE1P78406 SLC7A15P-201ENST00000424028 1363 ntBASIC14.52□□□□□ -0.08
RAE1P78406 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.52□□□□□ -0.08
RAE1P78406 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RAE1P78406 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RAE1P78406 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.52□□□□□ -0.08
RAE1P78406 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAE1P78406 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.52□□□□□ -0.08
RAE1P78406 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.52□□□□□ -0.09
RAE1P78406 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.52□□□□□ -0.09
RAE1P78406 SPTLC1P1-201ENST00000447199 261 ntBASIC14.52□□□□□ -0.09
RAE1P78406 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.52□□□□□ -0.09
RAE1P78406 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.52□□□□□ -0.09
RAE1P78406 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.52□□□□□ -0.09
RAE1P78406 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.52□□□□□ -0.09
RAE1P78406 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 RRP7BP-205ENST00000566851 833 ntBASIC14.52□□□□□ -0.09
RAE1P78406 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms