Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 BX640514.1-201ENST00000583223 1918 ntBASIC17.28■□□□□ 0.36
TPM4P67936 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM4P67936 MIR346-201ENST00000362234 95 ntBASIC17.28■□□□□ 0.36
TPM4P67936 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.28■□□□□ 0.36
TPM4P67936 SPDYE11-202ENST00000450699 704 ntBASIC17.28■□□□□ 0.36
TPM4P67936 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM4P67936 RNA5SP419-201ENST00000515908 135 ntBASIC17.28■□□□□ 0.36
TPM4P67936 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 KRT8P23-201ENST00000560090 1207 ntBASIC17.28■□□□□ 0.36
TPM4P67936 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM4P67936 AC034105.1-201ENST00000563488 319 ntBASIC17.28■□□□□ 0.36
TPM4P67936 SPDYE9P-201ENST00000570642 692 ntBASIC17.28■□□□□ 0.36
TPM4P67936 SPDYE10P-202ENST00000612005 668 ntBASIC17.28■□□□□ 0.36
TPM4P67936 SPDYE8P-202ENST00000612377 668 ntBASIC17.28■□□□□ 0.36
TPM4P67936 AL513190.1-201ENST00000621254 727 ntBASIC17.28■□□□□ 0.36
TPM4P67936 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM4P67936 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPM4P67936 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TPM4P67936 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM4P67936 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
TPM4P67936 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM4P67936 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
TPM4P67936 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM4P67936 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM4P67936 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM4P67936 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM4P67936 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TPM4P67936 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM4P67936 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TPM4P67936 MRPL3P1-201ENST00000400109 1033 ntBASIC17.27■□□□□ 0.36
TPM4P67936 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM4P67936 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
TPM4P67936 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM4P67936 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM4P67936 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM4P67936 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.27■□□□□ 0.36
TPM4P67936 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM4P67936 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.27■□□□□ 0.36
TPM4P67936 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.27■□□□□ 0.36
TPM4P67936 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM4P67936 AC104692.2-201ENST00000603054 253 ntBASIC17.27■□□□□ 0.36
TPM4P67936 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
TPM4P67936 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM4P67936 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM4P67936 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM4P67936 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM4P67936 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM4P67936 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.27■□□□□ 0.35
TPM4P67936 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TPM4P67936 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TPM4P67936 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC17.27■□□□□ 0.35
TPM4P67936 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TPM4P67936 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TPM4P67936 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TPM4P67936 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
TPM4P67936 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.26■□□□□ 0.35
TPM4P67936 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.26■□□□□ 0.35
TPM4P67936 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM4P67936 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.26■□□□□ 0.35
TPM4P67936 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC17.26■□□□□ 0.35
TPM4P67936 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TPM4P67936 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM4P67936 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.26■□□□□ 0.35
TPM4P67936 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM4P67936 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms