Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC007326.2-201ENST00000624224 7579 ntBASIC14.03□□□□□ -0.16
CXCR4P61073 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CXCR4P61073 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CXCR4P61073 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCR4P61073 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CXCR4P61073 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.03□□□□□ -0.16
CXCR4P61073 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCR4P61073 AL135744.1-201ENST00000565098 629 ntBASIC14.03□□□□□ -0.16
CXCR4P61073 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCR4P61073 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCR4P61073 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCR4P61073 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CXCR4P61073 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 AC007787.1-201ENST00000588095 1583 ntBASIC14.03□□□□□ -0.16
CXCR4P61073 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCR4P61073 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCR4P61073 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCR4P61073 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CXCR4P61073 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCR4P61073 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCR4P61073 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CXCR4P61073 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCR4P61073 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCR4P61073 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.02□□□□□ -0.16
CXCR4P61073 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.02□□□□□ -0.16
CXCR4P61073 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.02□□□□□ -0.16
CXCR4P61073 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CXCR4P61073 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.02□□□□□ -0.16
CXCR4P61073 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCR4P61073 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.02□□□□□ -0.16
CXCR4P61073 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CXCR4P61073 AC015818.8-201ENST00000587907 1519 ntBASIC14.02□□□□□ -0.16
CXCR4P61073 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CXCR4P61073 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CXCR4P61073 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.02□□□□□ -0.17
CXCR4P61073 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.02□□□□□ -0.17
CXCR4P61073 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 AC142381.1-201ENST00000426099 345 ntBASIC14.02□□□□□ -0.17
CXCR4P61073 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.02□□□□□ -0.17
CXCR4P61073 RPL13AP23-201ENST00000480739 586 ntBASIC14.02□□□□□ -0.17
CXCR4P61073 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCR4P61073 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
CXCR4P61073 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.02□□□□□ -0.17
CXCR4P61073 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.02□□□□□ -0.17
CXCR4P61073 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 AL645728.2-202ENST00000641679 227 ntBASIC14.02□□□□□ -0.17
CXCR4P61073 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CXCR4P61073 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCR4P61073 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCR4P61073 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.02□□□□□ -0.17
CXCR4P61073 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCR4P61073 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCR4P61073 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms