Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AL450487.1-201ENST00000426799 995 ntBASIC14.11□□□□□ -0.15
CDC42P60953 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC42P60953 AC074386.1-202ENST00000463561 864 ntBASIC14.11□□□□□ -0.15
CDC42P60953 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC42P60953 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.11□□□□□ -0.15
CDC42P60953 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 AL049840.3-201ENST00000602669 611 ntBASIC14.11□□□□□ -0.15
CDC42P60953 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC42P60953 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDC42P60953 AL031595.1-201ENST00000623969 4709 ntBASIC14.11□□□□□ -0.15
CDC42P60953 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
CDC42P60953 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.11□□□□□ -0.15
CDC42P60953 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.11□□□□□ -0.15
CDC42P60953 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC42P60953 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.1□□□□□ -0.15
CDC42P60953 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDC42P60953 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 DMBT1P1-203ENST00000636837 4628 ntBASIC14.1□□□□□ -0.15
CDC42P60953 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CDC42P60953 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDC42P60953 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDC42P60953 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.1□□□□□ -0.15
CDC42P60953 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC42P60953 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDC42P60953 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CDC42P60953 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC42P60953 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDC42P60953 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CDC42P60953 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.1□□□□□ -0.15
CDC42P60953 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.1□□□□□ -0.15
CDC42P60953 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.1□□□□□ -0.15
CDC42P60953 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC42P60953 AC018845.2-201ENST00000568326 409 ntBASIC14.1□□□□□ -0.15
CDC42P60953 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.1□□□□□ -0.15
CDC42P60953 AP002472.1-201ENST00000577490 586 ntBASIC14.1□□□□□ -0.15
CDC42P60953 RN7SL510P-201ENST00000581311 263 ntBASIC14.1□□□□□ -0.15
CDC42P60953 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC42P60953 AC099522.2-201ENST00000607001 744 ntBASIC14.1□□□□□ -0.15
CDC42P60953 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CDC42P60953 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC42P60953 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CDC42P60953 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CDC42P60953 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 AL928921.2-201ENST00000641325 2442 ntBASIC14.1□□□□□ -0.15
CDC42P60953 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC42P60953 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CDC42P60953 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CDC42P60953 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDC42P60953 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
CDC42P60953 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
CDC42P60953 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CDC42P60953 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC42P60953 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CDC42P60953 AZGP1P1-201ENST00000411909 902 ntBASIC14.09□□□□□ -0.15
CDC42P60953 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.09□□□□□ -0.15
CDC42P60953 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDC42P60953 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.09□□□□□ -0.15
CDC42P60953 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.09□□□□□ -0.15
CDC42P60953 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.09□□□□□ -0.15
CDC42P60953 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
CDC42P60953 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms