Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CLRN1P58418 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.77□□□□□ -0.21
CLRN1P58418 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLRN1P58418 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLRN1P58418 SRD5A3P1-201ENST00000603021 949 ntBASIC13.77□□□□□ -0.21
CLRN1P58418 AL390955.2-201ENST00000603032 514 ntBASIC13.77□□□□□ -0.21
CLRN1P58418 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLRN1P58418 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.77□□□□□ -0.21
CLRN1P58418 AC004840.1-201ENST00000636359 365 ntBASIC13.77□□□□□ -0.21
CLRN1P58418 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLRN1P58418 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.77□□□□□ -0.21
CLRN1P58418 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLRN1P58418 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLRN1P58418 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLRN1P58418 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.77□□□□□ -0.21
CLRN1P58418 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 TNRC18P2-201ENST00000417666 2714 ntBASIC13.76□□□□□ -0.21
CLRN1P58418 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 GHSR-202ENST00000427970 912 ntBASIC13.76□□□□□ -0.21
CLRN1P58418 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.76□□□□□ -0.21
CLRN1P58418 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 CYMP-203ENST00000474680 1263 ntBASIC13.76□□□□□ -0.21
CLRN1P58418 RNA5SP421-201ENST00000516864 134 ntBASIC13.76□□□□□ -0.21
CLRN1P58418 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.76□□□□□ -0.21
CLRN1P58418 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 AC104794.3-201ENST00000566840 1248 ntBASIC13.76□□□□□ -0.21
CLRN1P58418 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 AC005498.2-205ENST00000593218 784 ntBASIC13.76□□□□□ -0.21
CLRN1P58418 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 AL158212.4-201ENST00000624062 1286 ntBASIC13.76□□□□□ -0.21
CLRN1P58418 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.76□□□□□ -0.21
CLRN1P58418 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLRN1P58418 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLRN1P58418 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.76□□□□□ -0.21
CLRN1P58418 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CLRN1P58418 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.75□□□□□ -0.21
CLRN1P58418 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.75□□□□□ -0.21
CLRN1P58418 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLRN1P58418 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CLRN1P58418 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.75□□□□□ -0.21
CLRN1P58418 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.75□□□□□ -0.21
CLRN1P58418 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.75□□□□□ -0.21
CLRN1P58418 SPDYE18-201ENST00000510091 1050 ntBASIC13.75□□□□□ -0.21
CLRN1P58418 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.75□□□□□ -0.21
CLRN1P58418 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.75□□□□□ -0.21
CLRN1P58418 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
CLRN1P58418 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.75□□□□□ -0.21
CLRN1P58418 AC036164.1-201ENST00000570544 333 ntBASIC13.75□□□□□ -0.21
CLRN1P58418 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.75□□□□□ -0.21
CLRN1P58418 AC000095.1-201ENST00000603208 874 ntBASIC13.75□□□□□ -0.21
CLRN1P58418 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.75□□□□□ -0.21
CLRN1P58418 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.75□□□□□ -0.21
CLRN1P58418 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLRN1P58418 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLRN1P58418 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLRN1P58418 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms