Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CLDN12P56749 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN12P56749 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN12P56749 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN12P56749 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN12P56749 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN12P56749 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 MRPL3P1-201ENST00000400109 1033 ntBASIC13.42□□□□□ -0.26
CLDN12P56749 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLDN12P56749 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN12P56749 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN12P56749 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 RNA5SP419-201ENST00000515908 135 ntBASIC13.42□□□□□ -0.26
CLDN12P56749 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN12P56749 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN12P56749 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.42□□□□□ -0.26
CLDN12P56749 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN12P56749 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CLDN12P56749 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CLDN12P56749 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CLDN12P56749 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN12P56749 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN12P56749 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
CLDN12P56749 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLDN12P56749 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN12P56749 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN12P56749 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLDN12P56749 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN12P56749 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 TFAMP1-201ENST00000412727 736 ntBASIC13.41□□□□□ -0.26
CLDN12P56749 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.41□□□□□ -0.26
CLDN12P56749 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.41□□□□□ -0.26
CLDN12P56749 AP001005.1-201ENST00000571755 1248 ntBASIC13.41□□□□□ -0.26
CLDN12P56749 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CLDN12P56749 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLDN12P56749 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN12P56749 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CLDN12P56749 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN12P56749 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN12P56749 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLDN12P56749 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CLDN12P56749 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN12P56749 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN12P56749 AKAP8P1-201ENST00000434743 1349 ntBASIC13.4□□□□□ -0.26
CLDN12P56749 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDN12P56749 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLDN12P56749 AC104109.2-201ENST00000602919 1418 ntBASIC13.4□□□□□ -0.26
CLDN12P56749 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
CLDN12P56749 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN12P56749 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN12P56749 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CLDN12P56749 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN12P56749 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN12P56749 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN12P56749 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN12P56749 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms