Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.87□□□□□ -0.19
SUMO3P55854 RN7SL752P-201ENST00000463779 287 ntBASIC13.87□□□□□ -0.19
SUMO3P55854 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.87□□□□□ -0.19
SUMO3P55854 RN7SL692P-201ENST00000464677 288 ntBASIC13.87□□□□□ -0.19
SUMO3P55854 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SUMO3P55854 AC022616.1-201ENST00000518688 554 ntBASIC13.87□□□□□ -0.19
SUMO3P55854 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.87□□□□□ -0.19
SUMO3P55854 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.87□□□□□ -0.19
SUMO3P55854 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.87□□□□□ -0.19
SUMO3P55854 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SUMO3P55854 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.87□□□□□ -0.19
SUMO3P55854 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.87□□□□□ -0.19
SUMO3P55854 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SUMO3P55854 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.86□□□□□ -0.19
SUMO3P55854 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SUMO3P55854 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 AC091951.1-201ENST00000512854 2465 ntBASIC13.86□□□□□ -0.19
SUMO3P55854 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
SUMO3P55854 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.86□□□□□ -0.19
SUMO3P55854 ACE3P-201ENST00000423435 1973 ntBASIC13.86□□□□□ -0.19
SUMO3P55854 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.86□□□□□ -0.19
SUMO3P55854 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.86□□□□□ -0.19
SUMO3P55854 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.86□□□□□ -0.19
SUMO3P55854 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.86□□□□□ -0.19
SUMO3P55854 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.86□□□□□ -0.19
SUMO3P55854 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.86□□□□□ -0.19
SUMO3P55854 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.86□□□□□ -0.19
SUMO3P55854 PTP4A1P2-201ENST00000546033 454 ntBASIC13.86□□□□□ -0.19
SUMO3P55854 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.86□□□□□ -0.19
SUMO3P55854 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SUMO3P55854 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.86□□□□□ -0.19
SUMO3P55854 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 CU639417.3-201ENST00000624240 1404 ntBASIC13.86□□□□□ -0.19
SUMO3P55854 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
SUMO3P55854 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.86□□□□□ -0.19
SUMO3P55854 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SUMO3P55854 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SUMO3P55854 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SUMO3P55854 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SUMO3P55854 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.85□□□□□ -0.19
SUMO3P55854 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms