Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LIMK2P53671 AC138969.3-201ENST00000546612 1459 ntBASIC15.52■□□□□ 0.07
LIMK2P53671 AC138932.2-201ENST00000548268 1459 ntBASIC15.52■□□□□ 0.07
LIMK2P53671 AC126755.4-201ENST00000549796 1459 ntBASIC15.52■□□□□ 0.07
LIMK2P53671 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.52■□□□□ 0.07
LIMK2P53671 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LIMK2P53671 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LIMK2P53671 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LIMK2P53671 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
LIMK2P53671 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.51■□□□□ 0.07
LIMK2P53671 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 Z97205.2-201ENST00000564697 1639 ntBASIC15.51■□□□□ 0.07
LIMK2P53671 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.51■□□□□ 0.07
LIMK2P53671 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LIMK2P53671 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.51■□□□□ 0.07
LIMK2P53671 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.51■□□□□ 0.07
LIMK2P53671 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.51■□□□□ 0.07
LIMK2P53671 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.51■□□□□ 0.07
LIMK2P53671 SRD5A3P1-201ENST00000603021 949 ntBASIC15.51■□□□□ 0.07
LIMK2P53671 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.51■□□□□ 0.07
LIMK2P53671 AC004790.1-201ENST00000612686 536 ntBASIC15.51■□□□□ 0.07
LIMK2P53671 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.51■□□□□ 0.07
LIMK2P53671 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LIMK2P53671 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
LIMK2P53671 REXO1L2P-201ENST00000425429 2069 ntBASIC15.51■□□□□ 0.07
LIMK2P53671 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LIMK2P53671 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.51■□□□□ 0.07
LIMK2P53671 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LIMK2P53671 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.51■□□□□ 0.07
LIMK2P53671 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LIMK2P53671 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LIMK2P53671 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LIMK2P53671 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LIMK2P53671 OR8S1-201ENST00000310194 1080 ntBASIC15.5■□□□□ 0.07
LIMK2P53671 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
LIMK2P53671 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 SPDYE18-201ENST00000510091 1050 ntBASIC15.5■□□□□ 0.07
LIMK2P53671 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.5■□□□□ 0.07
LIMK2P53671 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 AC004461.2-201ENST00000629517 803 ntBASIC15.5■□□□□ 0.07
LIMK2P53671 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 AP000845.1-201ENST00000581677 2131 ntBASIC15.5■□□□□ 0.07
LIMK2P53671 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms